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Oommen K Mathew, PhD

Associate Director - Bioinformatics, MedGenome Labs Pvt Ltd

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About

Oommen K Mathew, PhD is a highly skilled computational biologist and data scientist with over 12 years of relevant experience. He is currently serving as the Senior Scientist (Computational Biology) and Head of Bioinformatics at AgriGenome Labs Pvt Ltd, where he leads the development of computational biology algorithms that work on multi-core/multi-processor environments and user-friendly web interfaces for applications and databases. Oommen holds a PhD in Bioinformatics from the National Center for Biological Sciences (NCBS) Bangalore, along with an MSc in Bioinformatics and Bachelors in Computer Applications (BCA). He is passionate about genomics, HPC algorithms, bioinformatics, computational biology, and next-generation sequence (NGS) data analysis, among other specialized areas. Oommen is an expert in genome assembly, annotation, protein structures, algorithm development, and bioinformatics software and database development. He has extensive experience in animal genomics, bacterial genomics, plant genomics, metagenomics, microbiome, biological data integration, structural bioinformatics, biological network analysis, and project management. Apart from his technical skills, Oommen is also a technology leader with expertise in Python, R, flask, Scipy, MySQL, HTML, CSS, Javascript, webservices, and APIs. He has mentored several professionals in the field and is known for his automation skills. In his free time, Oommen enjoys playing badminton and exploring new places. He is also a music enthusiast and spends his extra time listening to music. His research work has been published in several journals, and he has presented his work at various conferences. Oommen is a highly motivated individual who is committed to delivering high-quality work and is always looking for new challenges to enhance his skills.

Education

national center for biological sciences

mahatma gandhi university

Companies

medgenome

indian institute of information technology kottayam

agrigenome labs pvt ltd

ncbsbangalore

braddock infotech

rkc info tech

macfast

Experience

14.8 Years

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Experience

Associate Director Bioinformatics Engineering

medgenome

2022 - Present

Adjunct Faculty Member

indian institute of information technology kottayam | Kottayam Area, India

2019 - Present

Senior Scientist (Computational Biology) and Head of Bioinformatics

agrigenome labs pvt ltd | Kochi, Kerala, India

2021 - 2022

Senior Scientist (Computational Biology) and Site head

agrigenome labs pvt ltd | Kochi, Kerala, India

2020 - 2021

Bioinformatics Scientist

agrigenome labs pvt ltd | Kochi, India

2017 - 2020

Research Fellow

ncbsbangalore | Bangalore

2012 - 2017

Tech Lead

braddock infotech | Kochi

2012 - 2012

Senior Software Analyst

rkc info tech

2007 - 2011

Technical Trainer / Software Engineer

macfast

2005 - 2007

Skills

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AJAX

Algorithm Development

Algorithms

Annotation

Application Programming Interfaces (API)

Automation

Bioinformatics

BioPerl

BioPython

Biotechnology

Cascading Style Sheets (CSS)

Computational Genomics

CSS

Data Analysis

Data Integration

Data Science

Data Scientist

Database Development

Databases

differential gene expression

Flask

gene annotation

Gene Expression

gene prediction

Genome Analysis

Genome Assembly

Genomics

HTML

html

Human Genetics

illumina

Integration

JavaScript

Javascript

jQuery

Leadership

Life Sciences

Linux

Machine Learning

Metagenomics

MongoDB

Music

MySQL

pacbio

Perl

Plant Genetics

plant genomics

Project Management

Protein Structure

Protein Structure Prediction

Protein-protein Interactions

Python

python-flask

R

Research Scientist

RNAseq

RNAseq Analysis

scipy

Shell Scripting

SQL

transcriptome

Transcriptomics

variant calling

Web

Web Applications

Web Services

Contact Details

Email (Verified)

oomXXXXXXXXXXXXXom

Mobile Number

+91XXXXXXXX22

Education

national center for biological sciences

Doctor of Philosophy (PhD)

2012 - 2017

mahatma gandhi university

MSc Bioinformatics

2002 - 2004

mahatma gandhi university

BCA

1999 - 2002

Frequently asked questions

What company does Oommen K Mathew, PhD work for?

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Oommen K Mathew, PhD works for medgenome

What is Oommen K Mathew, PhD role in his workplace?

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Oommen K Mathew, PhD 's role in his workplace is Associate Director Bioinformatics Engineering

What is Oommen K Mathew, PhD 's tenure in his workplace?

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Oommen K Mathew, PhD 's tenure in his workplace is 2.00 years

What is Oommen K Mathew, PhD 's total experience?

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Oommen K Mathew, PhD 's total experience is 14.75 years

What is Oommen K Mathew, PhD 's LinkedIn profile?

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Oommen K Mathew, PhD 's LinkedIn profile can be found here

What is Oommen K Mathew, PhD 's email address?

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Oommen K Mathew, PhD 's email address is oomXXXXXXXXXXXXXom. Unlock here

What is Oommen K Mathew, PhD 's phone/WhatsApp number?

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Oommen K Mathew, PhD 's phone number is +91XXXXXXXX22. Unlock here

What schools did Oommen K Mathew, PhD attend?

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Oommen K Mathew, PhD has attended national center for biological sciences, mahatma gandhi university, mahatma gandhi university

What companies has Oommen K Mathew, PhD worked with?

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Oommen K Mathew, PhD has worked with medgenome, indian institute of information technology kottayam, agrigenome labs pvt ltd, agrigenome labs pvt ltd, agrigenome labs pvt ltd, ncbsbangalore, braddock infotech, rkc info tech, macfast

What are some of Oommen K Mathew, PhD 's skills?

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Oommen K Mathew, PhD has skills in AJAX, Algorithm Development, Algorithms, Annotation, Application Programming Interfaces (API), Automation and more.

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